Comparison of organic and synthetic amendments for poplar phytomanagement in copper and lead-contaminated calcareous soil.

Soil remediation can be achieved through organic and synthetic amendments, but the differences in the phytomanagement of trace metal-contaminated land are unclear. We conducted an outdoor microcosm experiment to simulate the effects of organic amendment citric acid and synthetic amendments EDTA and EGTA on poplar phytomanagement of copper (Cu)- and lead (Pb)-contaminated calcareous land at doses of 0, 1, 3, and 9 mmol kg-1. We found that soil-bioavailable Cu and Pb contents increased by 2.11-27.27 and 1.48-269 times compared to the control, respectively. Additionally, synthetic amendments had a long-lasting (within 25 days) effect on metal bioavailability relative to organic amendments. Consequently, organic amendments increased the root Cu and Pb contents by 2.68-48.61% and 6.60-49.51%, respectively, whereas synthetic amendments increased them by 65.94-260% and 12.50-103%. The Cu and Pb contents in the leaves were lower than those in the roots, and increased significantly by 47.04-179% and 237-601%, respectively, only under synthetic amendments. Interestingly, none of the amendments increased the Cu and Pb content in poplar stems (<5 mg kg-1), which remained within the normal range for terrestrial plants. Regardless of the type and addition level, the amendments did not affect poplar growth. Nevertheless, synthetic amendments caused a significant redistribution of metals (Cu: 22-32%; Pb: 23-53%) from the topsoil into the subsoil within the root zone at medium and high levels relative to organic amendments. Therefore, organic and synthetic amendments can assist poplar phytomanagement with a phytostabilization strategy for Cu- and Pb-contaminated calcareous land and obtain marketable wood biomass. Moreover, collecting leaf litter is crucial when using synthetic amendments at optimum concentration levels.

Tradeoffs between pH, dissolved organic carbon, and mineral ions regulate cadmium uptake by Solanum hyperaccumulators in calcareous soil.

Soil solution pH and dissolved organic carbon (DOC) influence cadmium (Cd) uptake by hyperaccumulators but their tradeoff in calcareous soils is unclear. This study investigated the mechanisms of Solanum nigrum L. and Solanum alatum Moench in calcareous soil using a combination of concentration gradient experiments (0.6-100 mg Cd kg-1) and soil solution composition analysis. The results showed that the soil solution pH of S. nigrum remained stable despite Cd stress. On average, the soil solution pH of S. alatum was 0.23 units higher than that of S. nigrum, although pH decreased significantly under high Cd stress. In addition, the concentrations of potassium (K) and calcium (Ca) in the soil solution of S. nigrum increased and decreased under low and high levels of Cd stress, respectively. In S. alatum, the K and Ca concentrations in the soil solution generally increased with increasing Cd stress levels. Moreover, the level of DOC in the soil solution of both plants was higher under Cd stress compared to the control, and a gradually increasing trend with Cd stress level was observed in S. alatum. Consequently, the bioconcentration factors of the roots (2.62-19.35) and shoots (1.20-9.59) of both plants were >1, while the translocation factors were <1, showing an obstacle of Solanum hyperaccumulators in transferring Cd into their aboveground parts. Redundancy analysis revealed that the Cd concentration in S. nigrum roots was significantly negatively correlated with the soil solutions of K and Ca. In contrast, Cd concentrations in S. alatum roots and shoots were significantly positively correlated with soil solution DOC, K, and Ca but negatively correlated with pH. Our results suggest that calcareous soil neutralizes the acidity of released protons but does not affect cation exchange, inhibiting DOC in assisting the translocation of Cd within plants.

Refined preferences of prioritizers improve intelligent diagnosis for Mendelian diseases.

Phenotype-guided gene prioritizers have proved a highly efficient approach to identifying causal genes for Mendelian diseases. In our previous study, we preliminarily evaluated the performance of ten prioritizers. However, all the selected software was run based on default settings and singleton mode. With a large-scale family dataset from Deciphering Developmental Disorders (DDD) project (N = 305) and an in-house trio cohort (N = 152), the four optimal performers in our prior study including Exomiser, PhenIX, AMELIE, and LIRCIAL were further assessed through parameter optimization and/or the utilization of trio mode. The in-depth assessment revealed high diagnostic yields of the four prioritizers with refined preferences, each alone or together: (1) 83.3-91.8% of the causal genes were presented among the first ten candidates in the final ranking lists of the four tools; (2) Over 97.7% of the causal genes were successfully captured within the top 50 by either of the four software. Exomiser did best in directly hitting the target (ranking the causal gene at the very top) while LIRICAL displayed a predominant overall detection capability. Besides, cases affected by low-penetrance and high-frequency pathogenic variants were found misjudged during the automated prioritization process. The discovery of the limitations shed light on the specific directions of future enhancement for causal-gene ranking tools.

Assessing the Beautiful China Initiative from an environmental perspective: indicators, goals, and provincial performance.

The Beautiful China Initiative (BCI) is part of China's national strategy for implementing the long-term goals of building an ecological civilization and promoting sustainable development. However, currently, there is no goal-oriented, comparable, and standardized indicator framework for monitoring the performance of the BCI. Here, we established the BCI from an environmental perspective (BCIE) index comprising 40 indicators and targets in eight fields and used a systematic approach to measure the distance and progress towards the goal of building a "Beautiful China" by 2035 at the national and subnational levels. Our analyses indicate that the BCIE index score (range: [0, 1]) was 0.757 at the national level and 0.628-0.869 at the provincial level in 2020. Between 2015 and 2020, the BCIE index scores of all provinces improved; however, large spatio-temporal variations were evident. Provinces with better BCIE performances exhibited relatively balanced scores across different sectors and cities. Our study revealed that the BCIE index scores at the city level surpassed provincial administrative boundaries, resulting in a wider range of aggregation. By focusing on the strategic arrangement of BCI, this study provides an effective index system and evaluation method for dynamic monitoring and phased evaluations at all levels of government in China.

Phosphorus supply level is more important than wheat variety in safe utilization of cadmium-contaminated calcareous soil.

Screening and cultivating crop varieties with low Cd accumulation is an effective way to safely utilize the Cd slightly contaminated soil. The characteristics and mechanism of Cd uptake by 13 wheat varieties in two calcareous soils with similar Cd contamination level but different P supply level were studied. The grain Cd concentration of almost all varieties in low-P soil was significantly higher than that in high-P soil and exceeded the maximum level of 0.2 mg kg-1 recommended by the Codex Alimentarius Commission. The pH value of low-P soil was significantly lower than that of high-P soil by 0.27 units, while leaf [Mn] (proxy for rhizosphere carboxylates) and the activities of soil alkaline phosphatase and phytase were significantly higher than those of high-P soil by 35%, 55%, and 286%, respectively. The exchangeable Cd concentration in low-P soil was 2.93 times higher than that in high-P soil, while the Cd concentration of oxides and organic species was significantly lower than that in high-P soil by 21% and 64%, respectively, collectively increasing soluble Cd concentration in low-P soil by 38%. In low-P calcareous soil, P mobilization induced the change of root-zone microenvironment, resulting in the mobilization of Cd.

Redistribution of calcium and sodium in calcareous soil profile and their effects on copper and lead uptake: A poplar-based phytomanagement.

Poplar serves as a phytostabilizator in phytomanagement of the trace metals (TMs) copper (Cu) and lead (Pb) contaminated land. In the process of long-term phytomanagement, it is not clear how the cycling of the mineral nutrients calcium (Ca) and sodium (Na) in calcareous soil will affect poplar remediation mechanisms. We selected a site contaminated by Cu and Pb and phytomanaged by Populus simonii Carr. stands of different ages (7, 14, and 28 years) to study the influencing mechanisms. The results showed that after afforestation, the Ca in the subsoil returned to the topsoil through fallen leaves, whereas the Na in the topsoil migrated downward to the subsoil by leaching, resulting in the redistribution of mineral nutrients in the soil profile. In addition, the Ca content in soil solution of the root-zone was significantly lower relative to that of the bulk soil, whereas the Na content in soil solution was significantly higher in all stands. As a result, because of the competitive adsorption of mineral nutrient and TM cations on the soil surface, the pool of bioavailable TM in root-zone soils did not significantly decrease with stand age. On the contrary, the TM content in poplar leaves (Cu: 31-37 mg kg-1; Pb: 62-84 mg kg-1) and litter (Cu: 230-790 mg kg-1; Pb: 394-1366 mg kg-1) increased significantly with stand age. Nevertheless, the TM content in poplar wood (Cu < 3 mg kg-1; Pb < 12 mg kg-1) remained at an extremely low level in all stands. Our results highlighted that strengthening leaf collection is necessary to eliminate ecological risks and ensure the safe production of poplar wood in the long-term phytomanagement of TM-contaminated land.

Temporal changes of calcareous soil properties and their effects on cadmium uptake by wheat under wastewater irrigation for over 50 years.

Calcareous soil has a strong buffering capacity for neutralizing acid and stabilizing cadmium (Cd) because of the high calcium carbonate (CaCO3) content. However, it is not clear whether the buffering capacity of calcareous soil can be maintained after long-term wastewater irrigation. We selected a typical area in western China that has been irrigated with wastewater for over 50 years to study the temporal changes of soil properties and their effects on Cd uptake by wheat. The results showed that compared with the background level before the 1960s, the soil pH and CaCO3 content in 2018 were lower by 0.80 units and 35%, respectively, while the soil organic matter (SOM) content, Olsen phosphorus (P) content, and soil total Cd content in 2018 increased by 1.54, 13.05, and 164 times, respectively. Due to the significant decrease in the soil pH and CaCO3, the high load of soil total Cd and electrical conductivity, the low soil clay content, and the coupling of SOM with soil nitrogen and P, the input Cd was activated. Furthermore, the activated Cd was effectively taken up by wheat roots and transported to grains with the assistance of dissolved organic carbon. Our results highlight that long-term wastewater irrigation caused irreversible damage to soil buffering capacity, resulting in the Cd activation and the enhancement of Cd uptake by wheat.

Impact of poplar-based phytomanagement on metal bioavailability in low-phosphorus calcareous soil with multi-metal contamination.

Bioavailability of trace metals (TMs) is the key component in the management of TM-contaminated soils; however, its impact mechanism is unclear in low-phosphorus (P) calcareous soils afforested by fast-growing tree species for a long duration (>10 years). We selected a site contaminated with multiple TMs and phytomanaged by poplar (Populus hopeiensis Hu & Chow) to study the impact mechanism of plant-soil interactions on TM bioavailability along a long-term chronosequence (i.e., 10, 15, 20, and 25 years). We found that phytomanagement significantly decreased soil organic carbon (SOC) content, soil total nitrogen (N) content, and soil C/P and N/P ratios with stand age, but did not significantly change soil total P content. In contrast, soil available P content significantly changed in rhizospheric soils compared with the bulk soil, suggesting the tight coupling between the amplification of P turnover and N availability. Soil pH in rhizospheric soils significantly decreased by 0.22 to 0.32 units, while calcium carbonate (CaCO3) content decreased by 14% to 39%, as compared with the bulk soil. Bioavailable concentrations of cadmium, lead, and zinc were positively correlated with soil available P, whereas bioavailable nickel concentration was negatively correlated with soil pH. Furthermore, TM bioavailability in rhizospheric soils significantly increased with stand age, regardless of the metal type. Our results suggest that P mobilization associated with SOC depletion induced soil acidification followed by CaCO3 dissolution, collectively leading to metal mobilization with stand age.

Temporal changes of metal bioavailability and extracellular enzyme activities in relation to afforestation of highly contaminated calcareous soil.

Metal bioavailability and extracellular enzyme activity are two important indicators of soil quality in metal-contaminated soil. However, it is unclear how the chronosequence effect modifies these two factors in highly contaminated calcareous soils undergoing afforestation. We used Populus simonii Carr. and the calciphilous Ulmus macrocarpa Hance as contrasting tree species to study the chronosequence effect. We found that afforestation significantly increased soil total nitrogen (N) content as well as soil carbon (C)/phosphorus (P) and N/P ratios, but decreased soil total P content and soil C/N ratio, regardless of the tree species and stand age, suggesting strong P limitation. However, available P did not change significantly with stand age. In both tree species, P mobilization depleted soil organic matter through the priming effect of dissolved organic carbon, whereas the decrease in soil pH in the U. macrocarpa stands enhanced CaCO3 dissolution, collectively reducing the capacity of the soil to immobilize metals, resulting in increased metal bioavailability with stand age. The activity of oxidase (dehydrogenase) was positively correlated with bioavailable zinc concentration, soil electrical conductivity, and soil total N content. Hydrolase activities (alkaline phosphatase, ß-glucosidase, and urease) were significantly positively correlated with the ratios of soil C/N and C/P, soil pH, and CaCO3, but negatively correlated with soil N/P ratio and bioavailable cadmium concentration. Increasing stand age was associated with the gradual recovery of oxidase activity and remarkable inhibition of hydrolase activity. Our results suggest that the combination of soil hydrolase activity and metal bioavailability can predict soil quality in the afforestation of highly contaminated soils.

Nutrient levels within leaves, stems, and roots of the xeric species Reaumuria soongorica in relation to geographical, climatic, and soil conditions.

Besides water relations, nutrient allocation, and stoichiometric traits are fundamental feature of shrubs. Knowledge concerning the nutrient stoichiometry of xerophytes is essential to predicting the biogeochemical cycling in desert ecosystems as well as to understanding the homoeostasis and variability of nutrient traits in desert plants. Here, we focused on the temperate desert species Reaumuria soongorica and collected samples from plant organs and soil over 28 different locations that covered a wide distributional gradient of this species. Carbon (C), nitrogen (N), and phosphorus (P) concentrations and their stoichiometry were determined and subsequently compared with geographic, climatic, and edaphic factors. The mean leaf C, N, and P concentrations and C/N, C/P, and N/P ratios were 371.6 mg g(-1), 10.6 mg g(-1), 0.73 mg g(-1), and 59.7, 837.9, 15.7, respectively. Stem and root C concentrations were higher than leaf C, while leaf N was higher than stem and root N. Phosphorus concentration and N/P did not differ among plant organs. Significant differences were found between root C/N and leaf C/N as well as between root C/P and leaf C/P. Leaf nutrient traits respond to geographic and climatic factors, while nutrient concentrations of stems and roots are mostly affected by soil P and pH. We show that stoichiometric patterns in different plant organs had different responses to environmental variables. Studies of species-specific nutrient stoichiometry can help clarify plant-environment relationships and nutrient cycling patterns in desert ecosystems.

[Effects of nitrogen addition on soil physico-chemical properties and enzyme activities in desertified steppe].

To investigate the impacts of nitrogen (N) enrichment on soil physico-chemical property and soil enzyme activities in desert ecosystems, a field experiment by adding N at 0, 1.75, 3.5, 7, or 14 g N x m(-2) a(-1) was conducted in a temperate desert steppe in the southeastern fringe of the Tengger Desert. The results showed that N addition led to accumulations of total N, NO(3-)-N, NH(4+)-N, and available N in the upper soil (0-10 cm) and subsoil (10-20 cm), however, reductions in soil pH were observed, causing soil acidification to some extent. N addition pronouncedly inhibited soil enzyme activities, which were different among N addition levels, soil depths, and years, respectively. Soil enzyme activities were significantly correlated with the soil N level, soil pH, and soil moisture content, respectively.

Heavy metal accumulation by poplar in calcareous soil with various degrees of multi-metal contamination: implications for phytoextraction and phytostabilization.

The object of this study was to assess the capacity of Populus alba L. var. pyramidalis Bunge for phytoremediation of heavy metals on calcareous soils contaminated with multiple metals. In a pot culture experiment, a multi-metal-contaminated calcareous soil was mixed at different ratios with an uncontaminated, but otherwise similar soil, to establish a gradient of soil metal contamination levels. In a field experiment, poplars with different stand ages (3, 5, and 7 years) were sampled randomly in a wastewater-irrigated field. The concentrations of cadmium (Cd), Cu, lead (Pb), and zinc (Zn) in the poplar tissues and soil were determined. The accumulation of Cd and Zn was greatest in the leaves of P. pyramidalis, while Cu and Pb mainly accumulated in the roots. In the pot experiment, the highest tissue concentrations of Cd (40.76 mg kg(-1)), Cu (8.21 mg kg(-1)), Pb (41.62 mg kg(-1)), and Zn (696 mg kg(-1)) were all noted in the multi-metal-contaminated soil. Although extremely high levels of Cd and Zn accumulated in the leaves, phytoextraction using P. pyramidalis may take at least 24 and 16 years for Cd and Zn, respectively. The foliar concentrations of Cu and Pb were always within the normal ranges and were never higher than 8 and 5 mg kg(-1), respectively. The field experiment also revealed that the concentrations of all four metals in the bark were significantly higher than that in the wood. In addition, the tissue metal concentrations, together with the NH4NO3-extractable concentrations of metals in the root zone, decreased as the stand age increased. P. pyramidalis is suitable for phytostabilization of calcareous soils contaminated with multiple metals, but collection of the litter fall would be necessary due to the relatively high foliar concentrations of Cd and Zn.

[Nitrogen fixation potential of biological soil crusts in southeast edge of Tengger Desert, Northwest China].

Taking three typical types of biological soil crusts (BSCs), i.e., cyanobacterial-algal crust, lichen crust, and moss crust, in the southeast fringe of Tengger Desert as test objects, this paper studied their nitrogen fixation potential, seasonal fluctuation, and responses to the environmental factors from June 2010 to May 2011. During the whole study period, the nitrogenase activity (NA) of the cyanobacterial-algal, lichen, and moss crusts had significant difference, being 14-133, 20-101, and 4-28 micromol x m(-2) x h(-1), respectively, which indicated the critical role of the species composition of BSCs in nitrogen fixation. The NA of the three crust types had similar response characteristics to environmental factors. The NA had less correlation with the precipitation during the study period, but was positively correlated to the < 3 mm precipitation in the former 3 days of the experiment, indicating that the three types of BSCs could reach the maximum rate of nitrogen fixation under 3 mm precipitation. The NA of the three crust types had a significant quadratic functional relationship with air temperature, i.e., decreased after an initial increase. The NA of cyanobacterial-algal and lichen crusts declined rapidly when the temperature exceeded 30 degrees C, while the NA of moss crust began to decline when the temperature exceeded 25 degrees C, suggesting that different types of BSCs had different optimal temperature range of nitrogen fixation. The seasonal change of the NA of the three crust types was in the order of autumn > spring > summer > winter. The high air temperature in summer and the low air temperature (< 0 degrees C) in winter inhibited the NA of the crusts, while the suitable water and heat conditions in late spring and early autumn promoted the NA, which implied that the seasonal fluctuation of the NA was mainly controlled by the joint effect of the water and heat conditions. Under humid condition, the BSCs in the temperate desert zone had nitrogen fixation capacity throughout the year, and the controlling effects of environmental factors on the nitrogen fixation were hierarchical. Water condition was the key factor affecting the nitrogen fixation rate and duration of the crusts, while under the conditions of sufficient water supply and carbon storage, heat condition dominated the crusts nitrogen fixation rate.

[Lake eutrophication modeling in considering climatic factors change: a review].

Climatic factors are considered as the key factors affecting the trophic status and its process in most lakes. Under the background of global climate change, to incorporate the variations of climatic factors into lake eutrophication models could provide solid technical support for the analysis of the trophic evolution trend of lake and the decision-making of lake environment management. This paper analyzed the effects of climatic factors such as air temperature, precipitation, sunlight, and atmosphere on lake eutrophication, and summarized the research results about the lake eutrophication modeling in considering in considering climatic factors change, including the modeling based on statistical analysis, ecological dynamic analysis, system analysis, and intelligent algorithm. The prospective approaches to improve the accuracy of lake eutrophication modeling with the consideration of climatic factors change were put forward, including 1) to strengthen the analysis of the mechanisms related to the effects of climatic factors change on lake trophic status, 2) to identify the appropriate simulation models to generate several scenarios under proper temporal and spatial scales and resolutions, and 3) to integrate the climatic factors change simulation, hydrodynamic model, ecological simulation, and intelligent algorithm into a general modeling system to achieve an accurate prediction of lake eutrophication under climatic change.